Quality control

แชร์
ฝัง
  • เผยแพร่เมื่อ 23 ส.ค. 2024

ความคิดเห็น • 11

  • @sunnetinternationalbusines9910
    @sunnetinternationalbusines9910 4 ปีที่แล้ว +3

    Wow these set of videos are the most comprehensive

  • @AlexiesB
    @AlexiesB 2 ปีที่แล้ว +1

    it's been a while since you published that, but it still so relevant. thank you

  • @HeLiAn5
    @HeLiAn5 2 หลายเดือนก่อน

    Thank you so much for the helpful information! Is it possible to have these slides of the RNA-Seq course?

  • @MissAsdfb99
    @MissAsdfb99 2 ปีที่แล้ว

    Thank you for your information but how to do ? I mean we need to use a program for quality control? Is there any specific program?

    • @ChipsterTutorials
      @ChipsterTutorials  2 ปีที่แล้ว

      For read quality we recommend the FastQC program, or MultiQC for many samples. We have integrated them (and many other programs) in the Chipster analysis software which runs in a Web browser. For more info, please see chipster.csc.fi/.

    • @MissAsdfb99
      @MissAsdfb99 2 ปีที่แล้ว

      @@ChipsterTutorials Thank you and what if we zipped the FASTQ file , doest it be any problem? or it doesn't matter?

    • @ChipsterTutorials
      @ChipsterTutorials  2 ปีที่แล้ว

      @@MissAsdfb99 gzipped FASTQ files work fine in Chipster, no problem :)

  • @MissAsdfb99
    @MissAsdfb99 2 ปีที่แล้ว

    What if we are getting an error like "id line did not start with @"?

    • @ChipsterTutorials
      @ChipsterTutorials  2 ปีที่แล้ว

      This means that your file is corrupted. Please see the possible solutions proposed by Simon Andrews at github.com/s-andrews/FastQC/issues/37