Agree. For me it very strange. That there is no real aligner used in transcriptomics. Professionals aware that STAR (golden standart), hisat2 or kallisto shoul be used. I fell that this video is generated by AI. This mistake about splice awareness is to bad. This could not be done by a real bioinformatician.
Amazing presentation. Very helpful. Much appreciated.
Thank you Daniel
superb!!
how can i see the ppt document ?
You can access the full course material here: edu.t-bio.info/course/transcriptomics-1/
Why are we interested on exons?
Exons can contain mi/ncRNAs, spliceosomes, or can even be introns during alternative splicing.
Bowtie2 is not splice aware🤨
Agree. For me it very strange. That there is no real aligner used in transcriptomics. Professionals aware that STAR (golden standart), hisat2 or kallisto shoul be used. I fell that this video is generated by AI. This mistake about splice awareness is to bad. This could not be done by a real bioinformatician.