RNA Seq Analysis | Mapping Genome Reads with STAR Aligner and visualizing with IGV - Episode 1

[@davidmunglah9230]

Thank you for this! Really helpful.

[@grace_chi1857]

Thanks a lot for this video. Please, could you explain the function of the genomeSAindexNbases 12 option you used? Thank you.

[@ffrostings6403]

Can we do mapping using nextflow??

[@brunovinagre427]

thanks for you job!

[@serychristianrenaud]

Thanks

[@LamPhan-xt1lr]

Hello, I cannot run "fastqc" command, it says "command not found: fastqc". I appreciate your help. Everything else up to this point works well, I get stuck at 15:04.

[@LamPhan-xt1lr]

I emailed him and he helped answer my question. Turned out I did not activate the environment. I missed that step. I was able to run fastqc command after activating the environment by "conda activate mapping". Thank you sir for helping.

[@sultankdp]

sir how to open .ssj file