Really useful to me all your videos!! thanks a lot!! very clear. I would like to filter the reads mapped. Which is the tutorial where you explain this? Thank you again and greetings from Argentina 😊
At the moment, there is one video.th-cam.com/video/ANkrf7khH-w/w-d-xo.html I am working on other filtering videos. But if you need help urgently , you can book a session with me clarity.fm/search/vincentappiah
Download the ebook and commands here: www.patreon.com/posts/genome-mapping-78145935
lots of love and respect from INDIA sir
Thanks for the bioinfromatics videos.
Have you got video about structural variation calling?
After this video, which video should I watch for stats in R
Thank you. It was really helpful.
Really useful to me all your videos!! thanks a lot!! very clear. I would like to filter the reads mapped. Which is the tutorial where you explain this? Thank you again and greetings from Argentina 😊
At the moment, there is one video.th-cam.com/video/ANkrf7khH-w/w-d-xo.html
I am working on other filtering videos. But if you need help urgently , you can book a session with me clarity.fm/search/vincentappiah
@@bioinformaticscoach Thank you very much for your answer! I´m going to do it now!
@@ceci5393 here is the link to book a session: clarity.fm/search/vincentappiah
is there a way to make the output in fastq.gz format instead of .SAM? thanks
Yes. It's possible.
You can use samtools to do that.
I have my owm fungus sequencing data
I tried doing same with my data and alingmemt rate comes out 1.12%
You need to make sure you are using the correct reference sequence. You can also do QC to check if you have enough reads
Thank