Manual changes to PLINK genotype files

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  • เผยแพร่เมื่อ 18 พ.ย. 2024

ความคิดเห็น • 2

  • @davidguardamino
    @davidguardamino ปีที่แล้ว

    Hi!! Is there a way to transform a ped file to csv in plink?

    • @GenomicsBootCamp
      @GenomicsBootCamp  ปีที่แล้ว

      Hi,
      I think not in PLINK, but you just need to replace the space delimiters wit commas, and you are done. Any environment and approach could be used. R is my favorite of yourse, but gets tricky quickly with large files. In general the Linux command line tools are the most efficient for something like this.