How to make publication quality figures | Part I | ChimeraX

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  • เผยแพร่เมื่อ 24 มิ.ย. 2022
  • UCSF ChimeraX can be used to generate publication-quality figures.
    Explore the tool to know more.
    For selecting multiple atoms click Cntrl+Shift+Leftmousebutton
    #ucsfchimera
    #molecularmodeling
    #drugdesigning
    #docking
    #publication
    #qualityfigures
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ความคิดเห็น • 13

  • @BioinfoCopilot
    @BioinfoCopilot  2 ปีที่แล้ว

    Stay tuned for today’s video regarding the publication quality figures using DS visualizer!

  • @orawanthepmanee9540
    @orawanthepmanee9540 ปีที่แล้ว +1

    Could you please tell me how to save the tiff file with 300 dpi?
    Thank you in advance!

    • @BioinfoCopilot
      @BioinfoCopilot  ปีที่แล้ว

      If you are using Mac the use preview and export as tiff.

  • @akritisri
    @akritisri ปีที่แล้ว +1

    can you please make video on simultaneous multi ligand docking using autodock vina?

    • @BioinfoCopilot
      @BioinfoCopilot  ปีที่แล้ว

      Will update soon. The hack is you have to use PyRx software for multiple ligands.

    • @akritisri
      @akritisri ปีที่แล้ว

      @@BioinfoCopilot thank you so much for suggestion. I am started using PyRx software.

    • @shamshadather2696
      @shamshadather2696 3 หลายเดือนก่อน +1

      I have been using Dockey it's so cool

    • @BioinfoCopilot
      @BioinfoCopilot  3 หลายเดือนก่อน

      Fantastic. I will make a tutorial soon. Thanks

  • @gauravranjan4951
    @gauravranjan4951 ปีที่แล้ว +1

    Sir, In one of my Molecule, When I am trying to go for 2D Interaction in Discovery Studio visualizer, its showing LIGAND IS NOT IN A SINGLE FRAGMENT. kindly help regarding it. I am trying to learn docking by watching your videos.

    • @BioinfoCopilot
      @BioinfoCopilot  ปีที่แล้ว

      Your molecules does it contains metal ions? You have to optimise your ligand using Avogadro. This is a very common problem in DS.

    • @gauravranjan4951
      @gauravranjan4951 ปีที่แล้ว

      @@BioinfoCopilot No Sir. Molecule is not having any metal Ion. As per your video, I optimized the geometry of the structure in the beginning itself from Avogadro. Out of 6 molecules, in only one of the molecule, I am facing this problem.

  • @RajnandaniKashyap
    @RajnandaniKashyap ปีที่แล้ว

    Don't add unnecessary music in the background.

    • @BioinfoCopilot
      @BioinfoCopilot  11 หลายเดือนก่อน

      I will keep in mind. Thanks