An R package in 15 minutes (Bioinformatics S13E2)

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  • เผยแพร่เมื่อ 26 ธ.ค. 2024

ความคิดเห็น • 6

  • @dereksniper
    @dereksniper หลายเดือนก่อน +1

    Thank you for summarizing and sharing this info!

    • @DannyArends
      @DannyArends  หลายเดือนก่อน

      My pleasure! R packages are a great way to get your research out there

  • @sdsiljee
    @sdsiljee ปีที่แล้ว +1

    Thank you for another great video! Do you have any tips for creating a package from a large shiny app?

    • @DannyArends
      @DannyArends  ปีที่แล้ว +1

      In theory and practice this can be done in a similar fashion, just put all the functions in the package and export the main function to the user, make sure to have the package depend on shiny and other libraries used.
      Normally shiny apps will not be distributed as R packages, but via the web, people create the app deploy it on their server (or a server dedicated to hosting shiny apps) and have users interact with the shiny app via their browser.

    • @sdsiljee
      @sdsiljee ปีที่แล้ว

      @@DannyArends Thank you for your prompt response!
      I'm making an app to run mass-spectrometry proteomics analysis for non-coders.
      Initially I had planned to share my app via the web, but given the large files and computational power required, I figured it's probably better to make it easily available as a package to run locally.

    • @DannyArends
      @DannyArends  ปีที่แล้ว

      Nice, then just package up the shiny app and have people run it locally. Good luck 👍