Use of GAPIT in Genome-Wide Association Studies

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  • เผยแพร่เมื่อ 6 พ.ย. 2024

ความคิดเห็น • 7

  • @zhiwuzhang
    @zhiwuzhang 10 ปีที่แล้ว +5

    Thank you for making such wonderful demonstration on our software package.

    • @NareshPanneerSelvambiochem
      @NareshPanneerSelvambiochem 4 ปีที่แล้ว

      Thank you too for developing such an amazing software platform for genomic scientists in agriculture.

  • @NareshPanneerSelvambiochem
    @NareshPanneerSelvambiochem 4 ปีที่แล้ว

    Beautiful presentation, getting me confident on working with GAPIT. Thank you so much, Pauli.

  • @julioamericosellani3216
    @julioamericosellani3216 ปีที่แล้ว

    Wonderful presentation. I'm having a trouble maybe you could help me. When I run the code I get this error message: "Perform numericalization"
    Error in ifelse(x == lev[lev != inter][1], 0, ifelse(x == inter, 1, 2)) :
    object 'inter' not found. I try many ways but I could not find a solution.

  • @baaliou2157
    @baaliou2157 5 ปีที่แล้ว

    Thank you very much for this insightful video about GAPIT. But I am facing a challenge on having some outputs like the QQ-plot, the manhattan plot, the allelic effect... And here is the error message that I recieve everytime from GAPIT before it stopps running the analysis: Error in GAPIT.QC(Y = Y, KI = KI, GT = GT, CV = CV, Z = Z, GK = GK) :
    GAPIT says: there is no place to match IDs! I would really appreciate your help.

    • @moaf70
      @moaf70 5 ปีที่แล้ว

      Hi, hopefully you would have solved the issue. If not, thre following link to a thread might give you the solution. Much success! groups.google.com/forum/#!msg/gapit-forum/T8fhToJRER4/odaEnc-sBAAJ

  • @cpsingh09
    @cpsingh09 11 ปีที่แล้ว

    Nice presentation