GWAS tutorial with GEMMA

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  • เผยแพร่เมื่อ 13 ก.ย. 2023
  • A Genome wide assocation study #GWAS #tutorial using #GEMMA and some open access data ( #deafness in #dogs)
    GEMMA download: github.com/genetics-statistic...
    The script used in the video: github.com/GenomicsBootCamp/c...
    The dog GWAS paper: doi.org/10.1371/journal.pone....
    The dog data from the paper: datadryad.org/stash/dataset/d...
    NEOGEN info:
    Uncover new possibilities with Neogen Genomics. Make sure to subscribe to Neogen’s email list in order to stay updated with the latest news: info.neogen.com/3pDirRa
    NEOGEN discount offer:
    Neogen would like to offer £100 off an £1000 spend on genotyping on their GGP arrays. Simply email lparry@neogen.com with the subject line ‘GENOMICS BOOTCAMP’ to access this offer.
    Terms and Conditions:
    This offer provides a £100 discount on a purchase of genotyping on GGP arrays totaling £1000 or more. To access this offer, email lparry@neogen.com with the subject line ‘GENOMICS BOOTCAMP’ This offer is valid for a limited time and may be subject to expiration or withdrawal without notice. This offer is not transferable or redeemable for cash or other forms of credit. The discount applies to the purchase price before taxes, shipping, or any other additional charges. The terms and conditions of this offer may be subject to change without notice at the discretion of Neogen. By accessing and using this offer, you agree to abide by these terms and conditions.

ความคิดเห็น • 10

  • @arthchaudhari4017
    @arthchaudhari4017 9 หลายเดือนก่อน +2

    Nicely explained GWAS using GEMMA

  • @World365updates
    @World365updates 9 หลายเดือนก่อน +1

    Great please expand this topic and also demonstrate the graph tuning for paper. How we can make attractive graphs for paper. Thanks again

  • @mervanbayraktar5269
    @mervanbayraktar5269 9 หลายเดือนก่อน +1

    Thank You So Much Dear

  • @uchigava
    @uchigava 8 หลายเดือนก่อน +1

    It's an excellent tutorial. Can you suggest anyway we can only extract specific trait associated SNPs done by GWAS?

  • @yawpr3ko837
    @yawpr3ko837 4 หลายเดือนก่อน +1

    A video on how to annotate the manhattan plot will be very useful🙏🙏

  • @serychristianrenaud
    @serychristianrenaud 9 หลายเดือนก่อน +1

    Thanks

  • @manuferrando6339
    @manuferrando6339 2 หลายเดือนก่อน

    Please, can you explain how to install GEMMA? Thnaks

  • @navinshrestha5842
    @navinshrestha5842 9 หลายเดือนก่อน

    Could anyone guide me on where can I find GWAS done with rrBLUP in R?