W20: Single Cell RNA-Seq Analysis with Python - Day 2

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  • เผยแพร่เมื่อ 1 ธ.ค. 2024

ความคิดเห็น • 9

  • @Ojaswini-Pathak
    @Ojaswini-Pathak 6 หลายเดือนก่อน

    In the Scree/Elbow plot made in the tutorial
    What is represented on the x and y axis
    why are the values given on y-axis negative

  • @saadrashidusmani832
    @saadrashidusmani832 3 ปีที่แล้ว +3

    Thank you

  • @lillyLi-t2c
    @lillyLi-t2c 9 หลายเดือนก่อน

    where can I get the Day2 data which was not found from the shared google drive

    • @Ojaswini-Pathak
      @Ojaswini-Pathak 8 หลายเดือนก่อน

      I think the data is same as that of Day1

  • @MasudAhmed-tk5gn
    @MasudAhmed-tk5gn ปีที่แล้ว

    For the last two self-test questions in the video, I got the answer to question one: there were a total of 32,738 cells that produced 2,286,884 gene counts.
    The answer to question two is: there are 16,634 non-zero count cells in the Dataframe, accounting for 50.8% of the total number of cells.
    Can someone tell me if I got it right?

  • @chrisdoan3210
    @chrisdoan3210 2 ปีที่แล้ว

    Thank you so much for this video! When I run your code, I got this error:
    AttributeError: 'StringMethods' object has no attribute 'starswith'. I think this is because str is a keyword in python. Would you please tell me how to fix this? Thank you so much!

    • @emojiman745
      @emojiman745 ปีที่แล้ว +1

      It is 'startswith' not 'starswith'. You forgot to type the 't'.

  • @saadzaheer5773
    @saadzaheer5773 2 ปีที่แล้ว +3

    at least give us a glimpse of what your data looks like.