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BioTuring Team
United States
เข้าร่วมเมื่อ 4 ก.ค. 2016
MetaReference: Cell typing to unveil Macrophage Subtypesin Idiopathic pulmonary fibrosis (IPF)
Identify subtypes of macrophage in IPF scRNA-seq data and uncover
new insights with MetaReference and cross-referencing annotation
through nearly 2000 studies.
new insights with MetaReference and cross-referencing annotation
through nearly 2000 studies.
มุมมอง: 92
วีดีโอ
SmartBulk: Unlocking the Story of Crohn's Disease with Bulk RNA-seq
มุมมอง 83หลายเดือนก่อน
In this tutorial, we'll guide you through SmartBulk's features to analyze the effectiveness of stem cell transplantation for Crohn's disease patients. We'll use a real-world dataset exploring immune cell populations after the procedure. Sample Dataset: Differences in Peripheral and Tissue Immune Cell Populations Following Haematopoietic Stem Cell Transplantation in Crohn's Disease Patients (aca...
Pseudotime analysis: Py-Monocle
มุมมอง 2004 หลายเดือนก่อน
BioTuring's Py-Monocle efficiently computes pseudotime on large single-cell datasets, facilitating visualization and understanding of dynamic cellular changes in biological processes. Visit: bioturing.com Email: support@bioturing.com
BBrowserX: Heatmap & Marker Genes
มุมมอง 1694 หลายเดือนก่อน
In BBrowserX, you can use the marker genes tool allows you to quickly identify a gene panel that distinguishes a population of cells from others. Furthermore, you can utilize the heatmap feature to quickly visualize and interpret gene expression. Visit BioTuring: bioturing.com Email: support@bioturing.com
A story of cancer-associated fibroblast (CAF) on Talk2Data by Dr. Son Pham, BioTuring CEO
มุมมอง 1574 หลายเดือนก่อน
Dr. Son Pham's talk @ 10X Genomics San Diego User Group Meeting - February 28th Visit BioTuring: bioturing.com Email: support@bioturing.com Dr. Son Pham, CEO and Chief Scientist of BioTuring: Son's bachelor thesis with researchers from Saint Petersburg and INRIA (the French research institute for digital sciences) led to several factors of running time improvements for the Google web page ranki...
BBrowserX: AUCell Enrichment Test & Enrichment Test
มุมมอง 1934 หลายเดือนก่อน
Identify significantly enriched groups of genes on BBrowserX. In this step-by-step tutorial, let's explore how to query for the enrichment of one or multiple gene sets with AUCell Enrichment and Enrichment Test. You can annotate gene sets from the Molecular Signatures Database (MSigDB) and your own customized gene sets on BBrowserX. Visit BioTuring: bioturing.com Email: support@bioturing.com
BBrowserX: Metadata Management
มุมมอง 1165 หลายเดือนก่อน
Metadata management on BBrowserX. In this tutorial, learn how to manage the metadata and create new annotations for your dataset. Visit BioTuring: bioturing.com Email: support@bioturing.com
Talk2Data: Gene search & Cell search
มุมมอง 1965 หลายเดือนก่อน
Query across the entire single-cell database using Talk2Data. In this tutorial, let's explore how to leverage BioTuring's curated database of over 120 million cells to analyze gene expression patterns across different cell types within seconds.
BBrowserX: Dimensionality Reduction and Clustering
มุมมอง 1605 หลายเดือนก่อน
Dimensionality reduction and clustering Dimensionality reduction is a technique to simplify complex data by reducing its number of dimensions while preserving key information. BioTuring enables researchers to ustomize embeddings used for Louvain clustering, t-SNE, and UMAP with new features, exclusively available in BBrowserX's private version and Talk2Data's custom atlas.
BioStudio: Working with files
มุมมอง 1126 หลายเดือนก่อน
File management on BioStudio The cloud-based workspace in BioStudio allows you to incorporate and manage resources from various data sources into your project, simplifying the data flow. Try now at: app-studio.bioturing.com/ #datamanagement #bioturing #biostudio #cloudplatform #bioinformatics
BBrowserX: Cell Type Prediction
มุมมอง 1896 หลายเดือนก่อน
Trained on a database of millions of single cells, BioTuring Cell Type Prediction can effortlessly assign cell type labels to your single-cell datasets. The model is available in both GUI form on the BioTuring Ecosystem and through APIs. Learn more at talk2data.bioturing.com/predict Visit BioTuring: bioturing.com Email: support@bioturing.com
CellChat: Explore how cells communicate
มุมมอง 4476 หลายเดือนก่อน
Cell-cell communication with CellChat on BioStudio. In this tutorial, you will learn how to apply graph theory to understand the complex cellular network in our body using CellChat. Figure 1: Single-cell transcriptional changes associated with drug tolerance and response to combination therapies in cancer www.nature.com/articles/s41467-021-21884-z#Sec9 CellChat application: - Inference and anal...
BioStudio: CellChat Introduction
มุมมอง 3496 หลายเดือนก่อน
Powered by BioStudio, CellChat application is specifically designed for biologists featuring an interactive user interface and efficient data organization. It also enhances analysis transparency and reproducibility through code availability and history management. Figure 1: The landscape of cell-cell communication through single-cell transcriptomics: pubmed.ncbi.nlm.nih.gov/33969247/ CellChat a...
BioStudio: How to search and work with a curated notebook
มุมมอง 1356 หลายเดือนก่อน
In this tutorial, we will guide you on browsing BioStudio’s notebook collection to find a method of interest and run it without requiring package installation or environment setup. Visit BioTuring: bioturing.com Email: support@bioturing.com
BBrowserX: Data Submission
มุมมอง 2226 หลายเดือนก่อน
BBrowserX supports a wide range of single-cell data formats, from CellRanger outputs, Scanpy objects, Seurat objects, full matrices, to TileDB SOMA. Visit BioTuring: bioturing.com Email: support@bioturing.com
BioStudio - All-in-one Bioinformatics Platform
มุมมอง 3677 หลายเดือนก่อน
BioStudio - All-in-one Bioinformatics Platform
BioTuring Lens: Spatial Deconvolution on Visium Data
มุมมอง 2318 หลายเดือนก่อน
BioTuring Lens: Spatial Deconvolution on Visium Data
Talk2Data: Customize in silico atlas in seconds
มุมมอง 2878 หลายเดือนก่อน
Talk2Data: Customize in silico atlas in seconds
When AI Meets Biology Webinar Highlights | Geneformer by Dr. Christina Theodoris
มุมมอง 8398 หลายเดือนก่อน
When AI Meets Biology Webinar Highlights | Geneformer by Dr. Christina Theodoris
When AI Meets Biology Webinar Highlights | scGPT by Dr. Bo Wang
มุมมอง 9828 หลายเดือนก่อน
When AI Meets Biology Webinar Highlights | scGPT by Dr. Bo Wang
Explore single-cell spatial and spatial proteomics data on BioTuring Lens
มุมมอง 1978 หลายเดือนก่อน
Explore single-cell spatial and spatial proteomics data on BioTuring Lens
Explore 10X Visium and Nanostring GeoMx DSP data with BioTuring Lens
มุมมอง 494ปีที่แล้ว
Explore 10X Visium and Nanostring GeoMx DSP data with BioTuring Lens
BBrowserX - The next generation platform for single-cell data analysis
มุมมอง 1.1Kปีที่แล้ว
BBrowserX - The next generation platform for single-cell data analysis
Explore single-cell spatial transcriptomics data on BioTuring Lens
มุมมอง 533ปีที่แล้ว
Explore single-cell spatial transcriptomics data on BioTuring Lens
bro was talking so fast he dimentionally reduced his internet connection
What was said about PCA when he resumed the differences between UMAP and PCA at 8:32?
damn why he cut him in the enddd, nice talk!
hope they can remove the background music
Excellent content, and thank you so much for sharing. These fundamentals were crucial for the UMAP implementation in practical day-to-day work.
What about stereo seq data analysis ? Can bioturing support that ?
I kept thinking there was something wrong with my network while trying to watch this. It took me a while to realize that it was simply recorded with all the lagginess. :-(
Amazing talk!
I lost interest beacuse the speaker talked too fast and the internet connection was awful. What a shame! The topic was interesting, though.
Linux support would be great!
Which software are you using , name please !!
BioVinci
why the other videos are private?
Hi Giulia, we are releasing a new version of the software with more advanced features. We are making new videos to replace the old ones.
I have had nothing but issues with this graphing program. Like one click and the graph would lose ALL it's formatting issues. The fact that they are asking for $800 dollars per year now is quite frankly astonishing to me. Would not recommend to anyone.
Hi Aurora. Thank you for constructive feedback. Our support team would like to reach out to you to troubleshoot your problem and gain more valuable feedback from you. Could you leave us a note via vinci@bioturing.com. Cheers.
Once complete, this will be an amazing tool. I like the alpha already!
Thank you! We have released a new version. It has more interesting features. You can check it out here:th-cam.com/video/aLPVPjgB6mE/w-d-xo.html
is this free?
which type of software , you have used
Very nice presentation by Dr. Ankur Sharma, I recommend this presentation as it gives a good understanding of the cellular heterogeneity and how to use single-cell sequencing to overcome some of the challenges of the field.
is this feature also available in free trial version ?