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@jordanrobinson690 Hi, did you find it?

@@Nick-fn8gz no, but I’ve been figuring it out on my own, thanks!

@@jordanrobinson690 Oh got it, do you know the difference between the super Pixel and histogram fiber diameter measurements? or which one is the best to consider?

Some time has passed since you asked but the answer is yes

I got the same problem. All of my operations are the same as the video, but nothing came after segmentation

Thank you, actually it just part of my task in class. I need to check my old laptop, but you can try using this plugin: imagej.net/_images/c/cc/DiameterJ_1-018.zip (I remember using this plugin).

@@ShidiqHidayat Thank you very much again for sharing this link. I have tried this plugin but the problem persists. I think this is because the plugin is not yet updated to work with the current versions of imageJ. I believe that you might have used a different version of imageJ that might be suitable for this plugin. I humbly request you to share your package from your old laptop if possible. I will never forget your help.

@@harunv6599 Please download my copied ImageJ (with DiameterJ plugin): www.dropbox.com/s/o65ud6e713n6aml/ImageJ_DiameterJ.zip?dl=0 I used ImageJ 1.5.0 and DiameterJ 1.018 and rerun smoothly with the same SEM image on the newest Windows 10 20H2 (64bit) with newest JRE. ImageJ 1.5.0: wsr.imagej.net/distros/win/ DiamterJ: imagej.net/_images/c/cc/DiameterJ_1-018.zip

@@ShidiqHidayat Dear Shidiq, Finally it works. Thanks a lot for timely help. Wishing you great success. Thanks again.

Yes, but you must set up pixel to micrometer in imageJ (from scaling line SEM image information)

Maybe you must set up or calibrate pixel to micrometer from scaling line SEM image. Sorry for late answer.

same problem here

It's initial version, I made it using R shiny

@@ShidiqHidayat How do we get it? I have fibers I want to analyze and I want to follow the steps in your video to obtain the same Histogram. I can get Origin Pro but missing your TOR-C app

@@Sanellh It just simple program to call R script that convert binding frequency data to unbin data, like this: --------------------------------------------- dataset <- read.table(file = '2_M1_Radius Histo.csv', header = TRUE, sep = ',') head(dataset) M <- dim(dataset) M unbin <- data.frame() for (i in 1:M[1]){ temp <- rep(dataset[i, 1], dataset[i, 2]) unbin <- c(unbin, temp) } unbin <- as.data.frame(unbin) unbin <- as.data.frame(t(unbin)) #unbin <- as.matrix(unbin) write.csv(unbin, file = 'unbin.csv', row.names = FALSE)

you also can use other program language

@@ShidiqHidayat please can you give me the script of this programme with shiny

tidak harus, itu program yg tugasnya untuk mengubah frekuensi bin ke nilai asli... misal, nilai x ada n buah, menjadi x, x, x, ..., x(n) bisa dicoba di origin, yang input langsung berupa radius dan frekuensi, kenapa pakai metode itu, karena pengen plot manual, bisa memilih lebar bin histogramnya, kalau langsung gak bisa milih, atau mungkin saya yg belom tau

Thank you very much for your kind information

No problem. By the way, this is the link to the training i was referring to: sites.google.com/site/diameterj/home

Hi @@ShidiqHidayat , to your knowledge, is there a similar video for using diameter J in 2022?

@bilalsaeedahmad6616 Do you still have the tutorial? Online is not available

basically it's just a launcher program to launch the R script that can change the histogram data (bin data) to unbin frequency data. You can use any program language to do that. Example: radius 2 nm have 10 frequency, it become 2,2,2,2,...2 (10 times)