I have been working my a** of to connect my new Mac to git and GitHub. Thank you so much. I couldn't believe how easy was it! You gained a new subscriber.
Thanks a lot for this video very clear and straightforward. I'm asked to include a username and password rather than having it pushed straight away as in your video. After typing username and password, I get the error message "Support for password authentication was removed on August 13, 2021." I have read that using SSA would overcome this issue, do you have a video that goes through it? Thanks!
What would you suggest doing if I already had an existing R project that I was working with, that I want to tie to Git? Seems that the only options of "New Directory", "Existing Directory", and "Version Control" are useful if you want to create a new project, but I'm not looking to create a new project
Hi Jamie - Thanks for asking! Within RStudio, go "Tools->Version Control" and then for Version control system select "Git". Then click the "Yes" button at the following pop up messages. Then using the Git tab you can stage and commit your current files. Then, I'd go to GitHub to set up a remote repository to push an existing repository. The commands they give you to run you can run from a terminal window within RStudio. I'll see if I can't add this topic to my existing queue of topics.
Very interesting video. However, most of the time Push and Pull bottom are grey. Do you have a so easier video to master how to connect local git in Studio to git online. Thank you!
Here's a few others to check out... th-cam.com/video/bUoN85QvC10/w-d-xo.html th-cam.com/video/DnwEaa5QtpI/w-d-xo.html th-cam.com/video/O4he8SUdP1U/w-d-xo.html
You can push anything up to GitHub as long as it isn’t super big. That being said, if it’s an interactive figure, you’ll have to use GitHub pages to get it rendered as an interactive (this is how the entire riffomonas website is constructed)
Thank you for an informative video, on the new project wizard after entering the repository URL when I enter to create a project it asks me for git user name and password when I enter it then shows an authentication fail. I checked many times username and password are correct. what could be the issue and how to resolve it? Thanks
@@satire6344 I'm sorry but I'm not sure what could cause it to work on one OS but not the other. I suspect there's a problem with the password manager or something. if you make it public, it should work without a password, but then it will be visible
Hi Pat, can you kindly share a video on ELASTIC net regression and BAYESIAN statistics with the regular glm. Does your training course include machine learning? Thanks
Hi there. Thank you for providing an informative video. I am currently using R 4.3.2, which does not allow me to create an R script saved as .md. The command screen says, "You cannot save this document with extension '.md.' And the choice I have is "Use .R" and "Use both," so the file name becomes "README.md.R." What does README.md files you created do? Can I skip these processes of creating README files? Thank you for being so helpful.
good tutorial, but I was expecting to see how to connect existing project on my local machine to github. I have an existing project that I want to put on github. thanks!
What would you like to be sure I cover as we discuss using machine learning tools to analyze microbioe data?
I have been working my a** of to connect my new Mac to git and GitHub. Thank you so much. I couldn't believe how easy was it! You gained a new subscriber.
Just the perfect tutorial I needed!!
My first time cloning projects on github, and you made it so easy. Thank you so much!!!
This is going to be way beyond my very limited experience in bioinformatics, but Im looking forward to learning more!
Hey Coral - you've got this! Thanks for trying to learn more and don't hesitate if you have any questions.
Thanks a lot for this video very clear and straightforward. I'm asked to include a username and password rather than having it pushed straight away as in your video. After typing username and password, I get the error message "Support for password authentication was removed on August 13, 2021." I have read that using SSA would overcome this issue, do you have a video that goes through it?
Thanks!
What would you suggest doing if I already had an existing R project that I was working with, that I want to tie to Git? Seems that the only options of "New Directory", "Existing Directory", and "Version Control" are useful if you want to create a new project, but I'm not looking to create a new project
Hi Jamie - Thanks for asking! Within RStudio, go "Tools->Version Control" and then for Version control system select "Git". Then click the "Yes" button at the following pop up messages. Then using the Git tab you can stage and commit your current files. Then, I'd go to GitHub to set up a remote repository to push an existing repository. The commands they give you to run you can run from a terminal window within RStudio. I'll see if I can't add this topic to my existing queue of topics.
@@Riffomonas Thanks, it worked!
@@jamiebehan1805 I hope you don't mind, but... this will be Monday's episode :)
Here you go - th-cam.com/video/bUoN85QvC10/w-d-xo.html
Thanks for this tutorial. I followed all the steps but I could not see the files mirrored on github? I could not figure out why! Any suggestions?
Was there any reason in particular that you selected .md as the file extensions for the README files?
That’s the typical extension for a markdown file. Thanks for watching!
Thank you very much; the explanations are pretty straightforward.
Wonderful - check back on Monday for another git/RStudio episode!
Great. Just what I needed. Thanks!
Wonderful- glad it was helpful 😊
Very interesting video. However, most of the time Push and Pull bottom are grey. Do you have a so easier video to master how to connect local git in Studio to git online. Thank you!
Here's a few others to check out... th-cam.com/video/bUoN85QvC10/w-d-xo.html th-cam.com/video/DnwEaa5QtpI/w-d-xo.html
th-cam.com/video/O4he8SUdP1U/w-d-xo.html
Thank you for your video! I have a question, Can I upload a chart created by r to github? (interactive chart)
You can push anything up to GitHub as long as it isn’t super big. That being said, if it’s an interactive figure, you’ll have to use GitHub pages to get it rendered as an interactive (this is how the entire riffomonas website is constructed)
Thank you for an informative video, on the new project wizard after entering the repository URL when I enter to create a project it asks me for git user name and password when I enter it then shows an authentication fail. I checked many times username and password are correct. what could be the issue and how to resolve it? Thanks
Can you access the repository if you make it public? I wonder if you might have the wrong URL or perhaps are trying to access someone else’s account
@@Riffomonas i am using private repository. it is accessible on windows but not on macOS . Should i make it public?
@@satire6344 I'm sorry but I'm not sure what could cause it to work on one OS but not the other. I suspect there's a problem with the password manager or something. if you make it public, it should work without a password, but then it will be visible
Great video! Thanks a lot. It will be very useful in my life.
Thanks Cristian - glad to hear it :) Please be sure to tell your friends and colleagues about the channel
Hi Pat, can you kindly share a video on ELASTIC net regression and BAYESIAN statistics with the regular glm. Does your training course include machine learning? Thanks
I don’t currently have one. Sorry
Very useful, thanks!
My pleasure Joaquín! Thanks for watching 🤓
Hi there. Thank you for providing an informative video. I am currently using R 4.3.2, which does not allow me to create an R script saved as .md. The command screen says, "You cannot save this document with extension '.md.' And the choice I have is "Use .R" and "Use both," so the file name becomes "README.md.R." What does README.md files you created do? Can I skip these processes of creating README files? Thank you for being so helpful.
Maybe you mean to create an "Rmd" file? This combines R code in plain text and can be coverted to html/docx/pdf/md using knitr
What if your Git was not detected on the system path?
Make sure you have it installed
good tutorial, but I was expecting to see how to connect existing project on my local machine to github. I have an existing project that I want to put on github. thanks!
Thank you!
Can I ask how you detail in your IRB applications your use of GitHub, especially regarding raw data?