How Does COVID-19 Testing Actually Work?

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  • เผยแพร่เมื่อ 31 พ.ค. 2024
  • Sars-Cov-2, the virus that causes Covid-19 is easily the most defining feature of 2020. In the last 8 months the world has changed radically and there have been plenty of fumbles as countries struggle to deal with the chaos. One of the most important issues has been testing for the virus. In this video, I aim to demystify how that testing actually works down to the chemical level and show exactly how it's done. We'll be covering the viruses anatomy, as well as three types of test: PCR, LAMP and Antibody.
    Earlier videos:
    PCR - • Everything You Could W...
    Gel Electrophoresis - • Gel Electrophoresis: H...
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    Try tab for a cause today:
    tab.gladly.io/thethoughtempor...
    ___________________________________________________________________
    00:00 - Introduction
    04:00 - Virus Anatomy Overview
    09:45 - PCR Overview
    13:30 - Performing PCR
    20:37 - Testing at Scale and Robots (Opentrons)
    23:30 - LAMP overview
    27:50 - Performing LAMP (Biofoundry)
    30:30 - Pros/Cons of Genetic Tests
    31:30 - Antibody Overview
    32:50 - Performing Antibody Test
    34:00 - How Antibody Tests Work
    38:00 - Summary
    ____________________________________________________________________
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    More resources, and citations:
    Kurzgesagt Covid Overview: • The Coronavirus Explai...
    A great writeup about the virus's anatomy: bit.ly/2FJq6G8
    JOGL: app.jogl.io/program/opencovid19
    Biofoundry: foundry.bio/
    Student Outbreak: bit.ly/2Qa3vEq
    Student Outbreak 2: bit.ly/34hQgdl
    Strokes In heathy people: bit.ly/2QdQREK
    Organ Damage: bit.ly/3aHONhy
    Aptamer Tests: rsc.li/3j2Fb3I
    Variations in Test Accuracy: bit.ly/2YlojNV
    Faulty probes: bit.ly/3aIPlDJ
    Contaminated Swabs: bit.ly/34fnVEt
    False positives FDA: bit.ly/3gojBFv
    E protein structure: bit.ly/3aN5Yyb
    MERS fact sheet: bit.ly/2CLUaQn
    Incidence of thromboembolism: bit.ly/2YgiBgc
    Stroke study: bit.ly/2E59Pei
    Stroke 2: bit.ly/2Yk8yql
    Cardiac infection: bit.ly/3l5DaWo
    Asymptomatic infection rate: bit.ly/2YgiOju
    Asymptomatic infection study: go.nature.com/2CLO2rb
    Organ damage in asymptomatic pateints: bit.ly/2YfaMHJ
    Wisconsin LAMP trial: bit.ly/3aIQfA7
    Healthy people stroke: bit.ly/2YmKEuB
    LAMP Assay design: bit.ly/3aJnqUv
    Mutation geneology: bit.ly/34hxqTs
    Cardiac outcomes: bit.ly/3hjJBmo
    False negative rate: bit.ly/3j47I95
    ACE2 distribution: go.nature.com/3aJsMyR
    Long Haulers article: bit.ly/2EgU9nP
    Long haulers Video: • COVID-19 Antibodies: W...
    Complete protein models: bit.ly/32akpIS
    Antibody test: bit.ly/2CIXT0S
    _________________________________________________________________________________
    Right after this video went up, one of my awesome friends Sebastian designed new primers which are much much better than the CDC or other primers used in this video. Here are their sequences for those interested and if you'd like, check out Sebastian's work here: binomicalabs.org/
    SpikeF - AGGAATTTTTATGAACCACAAATCA
    MembraneR - CGGTGATCCAATTTATTCTGTAAAC
    NucleoF - AAATGAAAGATCTCAGTCCAAGATG
    NucleoR - ACAGTTTGCTGTTTCTTCTGTCTCT
    Original Primers:
    N1F - GACCCCAAAATCAGCGAAAT
    N2F - ttacaaacattggccgcaaa
    N3F - GGGAGCCTTGAATACACCAAAA
    N2R - GCGCGACATTCCGAAGAA
    N2-LF - gggggcaaattgtgcaatttg
    N2-B3 - gacttgatctttgaaatttggatct
    N2-F3 - accaggaactaatcagacaag
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  • @thethoughtemporium
    @thethoughtemporium  3 ปีที่แล้ว +513

    Right after this video went up, one of my awesome friends Sebastian designed new primers which are much much better than the CDC or other primers used in this video. Here are their sequences for those interested and if you'd like, check out Sebastian's work here: binomicalabs.org/
    SpikeF - AGGAATTTTTATGAACCACAAATCA
    MembraneR - CGGTGATCCAATTTATTCTGTAAAC
    NucleoF - AAATGAAAGATCTCAGTCCAAGATG
    NucleoR - ACAGTTTGCTGTTTCTTCTGTCTCT

    • @sadface7457
      @sadface7457 3 ปีที่แล้ว +4

      when is the next micro fluidic video ♡

    • @wolf359loki
      @wolf359loki 3 ปีที่แล้ว +1

      Can you link to the Antibody test you used?

    • @rougenaxela
      @rougenaxela 3 ปีที่แล้ว +18

      It's nifty taking those little primer sequences, doing the reverse complement, and putting it into a BLAST search, and seeing only SARS-CoV-2 come back in the results.

    • @Ahnahtan0
      @Ahnahtan0 3 ปีที่แล้ว

      Very useful and informative! Valuable insight on this be-tweaked-st microbe toward its management.

    • @vitezhrabri4054
      @vitezhrabri4054 3 ปีที่แล้ว

      Hi so my question is the is a math solution how to do any kind of testing more efficiently, so is it possible to mix 4 or more samples together so it triggers if only one of them is positive?

  • @Bigfoot_With_Internet_Access
    @Bigfoot_With_Internet_Access 3 ปีที่แล้ว +1413

    Luckily I've managed to avoid getting it so far by hiding out here in the deep forests

    • @thethoughtemporium
      @thethoughtemporium  3 ปีที่แล้ว +567

      Username checks out

    • @tonk8735
      @tonk8735 3 ปีที่แล้ว +23

      Second time I've seen u

    • @dismissing
      @dismissing 3 ปีที่แล้ว +60

      @@tonk8735 are you saying you've spotted big foot twice?

    • @thorvaldspear
      @thorvaldspear 3 ปีที่แล้ว +4

      LOL

    • @tyrstone3539
      @tyrstone3539 3 ปีที่แล้ว +5

      Dude I see you everywhere

  • @alexandrelanhoso5538
    @alexandrelanhoso5538 3 ปีที่แล้ว +732

    I love how he casually use peas as coolant for his biological raw materials.

    • @MudakTheMultiplier
      @MudakTheMultiplier 3 ปีที่แล้ว +65

      They're reusable!

    • @supernoodles908
      @supernoodles908 3 ปีที่แล้ว +63

      @@MudakTheMultiplier and biodegradable

    • @spokehedz
      @spokehedz 3 ปีที่แล้ว +41

      @@supernoodles908 also great for when you bang your head on the fume hood...

    • @superdupergrover9857
      @superdupergrover9857 3 ปีที่แล้ว +26

      There's also a pea shortage. No joke, the demand for peas from the fake burger industry has caused a shortage.

    • @superdupergrover9857
      @superdupergrover9857 3 ปีที่แล้ว +13

      @@RoboticusMusic They can contaminate those vegan burgers all they want. Campbell's stopped production of their split pea soup (my favorite) because of the pea shortage.

  • @Ididathing
    @Ididathing 3 ปีที่แล้ว +1084

    i should have watched this video before i tried

    • @XavierXonora
      @XavierXonora 3 ปีที่แล้ว +30

      Nobody will know, it's fine

    • @boldey
      @boldey 3 ปีที่แล้ว +11

      wooo i like your vids woo

    • @t.lacey17
      @t.lacey17 3 ปีที่แล้ว +2

      Oof

    • @bazzasoutdoorsandhunting1122
      @bazzasoutdoorsandhunting1122 3 ปีที่แล้ว +2

      Yes! 😂😂😂

    • @blury6445
      @blury6445 3 ปีที่แล้ว

      Eh u shoud survive if u didnt die yet \○/

  • @DrakkarCalethiel
    @DrakkarCalethiel 3 ปีที่แล้ว +508

    PCR= Pipette, Cry, Repeat. Never change! 😂😂

    • @Queekusme
      @Queekusme 3 ปีที่แล้ว +24

      This needs to be a new T-shirt design

    • @DrakkarCalethiel
      @DrakkarCalethiel 3 ปีที่แล้ว +24

      @@Queekusme Hahaha, thus needs to happen!
      Shirt design on back:
      PCR
      Pipette (pipette logo)
      Cry 😭
      Repeat (uno reverse card)
      I would get one like this. :D

    • @thethoughtemporium
      @thethoughtemporium  3 ปีที่แล้ว +113

      Already working on it. Will have it out soon

    • @justalapwing
      @justalapwing 3 ปีที่แล้ว +3

      I'd buy it

    • @MultiPss
      @MultiPss 3 ปีที่แล้ว +4

      @@thethoughtemporium I need it

  • @Spit823
    @Spit823 3 ปีที่แล้ว +59

    Im 26 and had covid. I had symptoms for about 16 days. It felt like a moderate cold but with severe soreness and pain in my joints, especially my legs. I have moderate asthma and my breathing was easily controlled with my inhaler. I’m also a microbiologist so this whole pandemic has been extremely interesting. This is a great video.

  • @zuthalsoraniz6764
    @zuthalsoraniz6764 3 ปีที่แล้ว +369

    Meow Ludo Disco Gamma Meow Meow has to be the most cyberpunk name I've heard, at least for a real-life person

    • @MemesnShet
      @MemesnShet 3 ปีที่แล้ว +6

      I’ve read the “Gamma” as Grandma at first lmao

    • @pineapplesareyummy6352
      @pineapplesareyummy6352 3 ปีที่แล้ว +44

      I had to type that name into Google. That's his real name. He even ran for political office in Australia under the 'Science Party' and is a geneticist and entrepreneur. He is a serious guy with an unusual name.

    • @caca95cb
      @caca95cb 3 ปีที่แล้ว +7

      Dude he's totally related to Catra Applesauce Meow Meow from She-Ra

    • @Suninrags
      @Suninrags 3 ปีที่แล้ว +4

      @@pineapplesareyummy6352 did he change his name? I would assume he did

    • @waterunderthebridge7950
      @waterunderthebridge7950 3 ปีที่แล้ว +13

      Neon Red kill Yup, apparently he made a funny name list with his friends and picked one he liked to change his name to

  • @JustOneAsbesto
    @JustOneAsbesto 3 ปีที่แล้ว +238

    *L* (oop mediated isothermal) *AMP* (lification), I assume.

    • @GasparLewis
      @GasparLewis 3 ปีที่แล้ว +17

      Either that or another language, like "SI" for SI units.

    • @SquaredSmith
      @SquaredSmith 3 ปีที่แล้ว +10

      Nah it's that thing on your bedside table what shines light. It can detect the virus through... uhhh... science magic

    • @jrblast
      @jrblast 3 ปีที่แล้ว +9

      @@GasparLewis Or UTC where the English and French couldn't agree so they decided on an order that's wrong in both languages.

    • @EnriqueGonzalez-pw7xe
      @EnriqueGonzalez-pw7xe 3 ปีที่แล้ว +5

      Or maybe it just was developed by moths, who knows?

    • @grn1
      @grn1 3 ปีที่แล้ว

      Just paused the video to comment this.

  • @ernestkirstein6233
    @ernestkirstein6233 3 ปีที่แล้ว +104

    Great video but I kind of laughed at the end. Putting a "listen to the scientist" spiel at the end of a 40 minute technical video on covid testing is the definition of preaching to the choir.

    • @KnakuanaRka
      @KnakuanaRka 2 ปีที่แล้ว +3

      Yeah, the sorts of people who would need to learn that aren’t going to watch a video like this.

    • @drkastenbrot
      @drkastenbrot 2 ปีที่แล้ว +1

      @@KnakuanaRka They definitely watch videos like this, skipping through it to find bits that support their narrative and pull them out of context. Too bad this video doesnt say anything easily pulled out of context.

    • @KnakuanaRka
      @KnakuanaRka 2 ปีที่แล้ว +1

      @@drkastenbrot Wish more videos could be like this one in that way.

  • @desmond-hawkins
    @desmond-hawkins 3 ปีที่แล้ว +11

    Meow-Ludo Disco Gamma Meow-Meow is such an amazing name. Looking him up, I learned that he got in trouble for implanting his public transport card chip into his hand and was fined and summoned to court for traveling without a valid ticket (the judge dropped the case). Sounds like an interesting friend :-)

  • @StormBurnX
    @StormBurnX 3 ปีที่แล้ว +21

    it is INSANE how far you have come from the first videos I saw (the radio telescope/"wifi camera" adventures). the quality of science, recording, narrating, and overall production has jumped vastly; the scale and capability of your lap and tools have expanded as well; and perhaps most importantly, your passion for science and earnest pursuit of spreading knowledge has never yielded.
    Keep up the good work, keep yourself safe, and don't forget to take breaks sometimes so you don't burn yourself out!

  • @marcinzdunek2902
    @marcinzdunek2902 3 ปีที่แล้ว +234

    Anybody knows similiar channels about biology and chemistry? I only know this, and Nilered, and these topics are really interesting

    • @soumyadipbiswas9074
      @soumyadipbiswas9074 3 ปีที่แล้ว +31

      NielBlue

    • @soroushmirghasemi623
      @soroushmirghasemi623 3 ปีที่แล้ว +31

      Marcin Zdunek I’m more familiar with chemistry channels, there are channels like explosion & fire, nerdrage, nighthawk in light, if you are interested in lasers styropyro has some great content and does some chemistry at times as well, of and applied science does great stuff too.

    • @polymorphicprocrastination5345
      @polymorphicprocrastination5345 3 ปีที่แล้ว +51

      @@soumyadipbiswas9074 Applied Science

    • @notmynameanymore941
      @notmynameanymore941 3 ปีที่แล้ว +15

      ElementalMaker is a dude who does a lil bit of everything, from artificial rubies to sugar rocket builds, plus he is a pretty funny dude; reminds me of a pipeline worker but smarter /s

    • @domokospiller8306
      @domokospiller8306 3 ปีที่แล้ว +13

      Explosion & Fire

  • @jpjude68
    @jpjude68 3 ปีที่แล้ว +46

    15:03 Ah yes, the most used refrigerant agent in biolabs : frozen peas! :D

  • @haydennorris2913
    @haydennorris2913 3 ปีที่แล้ว +146

    I clicked as soon as I saw the patreon notification. Fantastic job on the animations. I can tell you really put your blood sweat and tears into this project. (sometimes literally) I also really appreciate that you didn't pull any punches for anti-maskers and conspiracy theorists. It's a bummer bad primers caused you so much trouble but I think the final product is some of your best work. I'm pretty hyped for the upcoming spider silk video. Keep up the good work Justin!

  • @DrmedWurst-se8df
    @DrmedWurst-se8df 3 ปีที่แล้ว +36

    As a healthcare professional I enjoyed your brief but scientific comprehension very much, to say it clear I love Your video! Thank you very much. (Of course I recommended it to many nerdy friends!)
    But I've been a bit suspicious with the Immunglobulines: As far as I know IgA (which is not present in your diagrams) is the only dimer (in humans), and IgD, which you present as a dimer is a monomer like IgE and IgG, too. Correct me if I am wrong!

    • @thethoughtemporium
      @thethoughtemporium  3 ปีที่แล้ว +19

      You're correct, that was my mistake. Good catch! That was meant to be IgA. Must've gotten it confused in my notes at some point

    • @Spree1775
      @Spree1775 3 ปีที่แล้ว +3

      @@thethoughtemporium I appreciate your integrity

  • @charles8072
    @charles8072 2 ปีที่แล้ว +4

    as a scientist like yourself, do you ever question the origins of COVID? do you think that there is anything you find uncertain or questionable about the virus?

  • @ryanc473
    @ryanc473 2 ปีที่แล้ว +5

    And who knew, almost two years later and, well, we're still dealing with this crap. At least we've got some legit treatments now (you know, with actual scientific evidence in support of them) and a few vaccines. Though, despite getting the initial course and the first booster shot, I just recently got Covid myself (for anyone wondering, 0/10, would not recommend). I'm fine now, but it still sucked for about a week. And before you ask, I'm only in my 20s. Though, I at least don't seem to have any long term effects from it...one of my coworkers that got it really early on, relatively speaking at least (I believe it was in about November 2020) and she still can't smell or taste stuff. Which, I couldn't even imagine going through life like that.
    Edit: Oh yeah, and even still, +1 on the wear a mask part from a healthcare professional here (I work in a hospital lab). They really can make a difference. Although, I'll also say that while the cleaning EVERYTHING before bringing it into your house was solid advice at the time this video went out, turns out, SARS-CoV-2 doesn't spread that great on surfaces, so that isn't as necessary as originally thought. Still not bad advice in general, just not a major factor in terms of Covid-19 spread.
    Edit 2: oh yeah, and another thing, that is only relevant now that it's been a while since the video came out...The false negatives are far less common nowadays. They absolutely were a huge issue early on (i.e. back when the video was posted), but nowadays the tests are quite reliable, even for the newer variants.
    Edit 3: Just one more thing I wanted to add regarding PCRs...if you've never been around a hospital lab style PCR, the thing I think that'll stick out the most is they are loud. Like, really, really loud. At least, the ones we use are absurdly loud. It's reminiscent of what a jet engine sounds like from inside the plane. So not loud enough to require earplugs, but loud enough that it's very clear something is happening. Of course, the PCRs at the hospital are more than just the block that heats and cools to specific temperatures. I mean, yeah, it has that part, but it also does all the measurements and detection internally. No gel electrophoresis or additional manipulation of the sample. It's literally just mix the UTM from the swab with the reagents, load, and await results. So it's possible the PCR like described in the video isn't quite as noisy, but I'm far from an expert on the stuff lol.
    Oh, nice, he talks about the difference in the diagnostic PCRs vs the one he initially described. Should've just kept watching
    Edit 4: and now I suddenly know why some samples we've tested consistently come out with an "inconclusive" result. None of us were quite sure the reason behind it, and after watching the video, well, I still don't know the underlying mechanism but at least I know the problem. One of the two primers came up positive, the other negative (and the human gene control part worked). Thus, the machine would've given an inconclusive result, despite multiple tests on the same sample. We always just give up and ask the nurse to recollect after it comes up inconclusive twice, and 999/1000 that solves the problem. So I still couldn't say why the initial sample was problematic, but at least I know the reason the machine insisted on giving a result of inconclusive.

  • @TerrierWhisperer
    @TerrierWhisperer 3 ปีที่แล้ว +16

    People are so caught up with deaths that they don't consider what happens to the survivors after - no matter if the illness was severe or mild.
    I had a 'mild' case, and I still have abdominal discomfort, occasional shortness of breath, and fatigue. Symptoms started on july 14

    • @thethoughtemporium
      @thethoughtemporium  3 ปีที่แล้ว +12

      I mention this near the end

    • @socialamoeba6455
      @socialamoeba6455 3 ปีที่แล้ว +7

      @@savage101. Good for you, sadly that is not the case for many.

    • @RBuckminsterFuller
      @RBuckminsterFuller 3 ปีที่แล้ว +3

      "Long-haulers" aren't unique to covid. A lot of people who are diagnosed with CFS/FM (chronic fatigue syndrome, fibromyalgia) likely started out with infections.

  • @gizmop0ny
    @gizmop0ny 3 ปีที่แล้ว +33

    "Build a neat and better mask"
    *becomes daftpunk*

  • @Tok_Janne
    @Tok_Janne 3 ปีที่แล้ว +8

    You can use aquarium gravel instead of frozen peas! Can even use it to flash freeze stuff if you have access to a -80°C freezer.
    Keep up the good work! Your videos are interesting to watch even for us who work in labs all day long.

    • @CodingCorvus
      @CodingCorvus 3 ปีที่แล้ว

      aqua-rium gra-vel, okay noted, anything else? (to flash freeze throw some liquid nitrogen over it)

    • @ayatotakema1194
      @ayatotakema1194 2 ปีที่แล้ว

      im guessing it has a higher energy desity right?

  • @MoritzvonSchweinitz
    @MoritzvonSchweinitz 3 ปีที่แล้ว +33

    at about 31:00 you state that people with past infections don't PCR test positive - actually, a surprising amount of people test positive weeks after a passed infection, due to "genetic garbage" still hanging around. These patients are, according to WHO standards, not considered infectious patients anymore.
    Do you know what this "genetic garbage" actually is? How long can naked pieces of RNA just hang out on mucous membranes?

    • @selkywaters
      @selkywaters 3 ปีที่แล้ว +16

      I know a guy that kept testing positive over and over. Finally somebody told him to rinse his sinuses out with saline. He did it three times a day for 8 days and finally tested negative.

    • @gabrielcohen1538
      @gabrielcohen1538 3 ปีที่แล้ว +3

      I thought such garbage was automatically kind of broken down but maybe it only applies to waste products from the cell and not from outside

    • @CodingCorvus
      @CodingCorvus 3 ปีที่แล้ว +3

      RNA is officially a proteïne so it can take a long time for it to break down under the temp it was meant to be in. (sorry i dont have a concrete number)

    • @Spree1775
      @Spree1775 3 ปีที่แล้ว

      @@CodingCorvus RNA RUBBISH..as a Physicist it's obsolete rubbish.

  • @ericaburke2366
    @ericaburke2366 3 ปีที่แล้ว +12

    Where I live, we’ve only had 27 cases (all recovered with no deaths nor community spread) and it’s been almost two months without a case. Hearing about what’s happening in the rest of the world seems fake, though I know that it is, unfortunately, true. All we did was follow our public health guidelines. ITS NOT THAT HARD!

    • @hammerth1421
      @hammerth1421 3 ปีที่แล้ว +1

      My county has 15 imported cases (that were detected) through people returning from their holidays. School starts again next week. This is gonna be great.

  • @Nincadas1
    @Nincadas1 3 ปีที่แล้ว +7

    Why are there so many dislikes wtf

  • @tateranus4365
    @tateranus4365 3 ปีที่แล้ว +3

    The term Coronavirus comes from Spanish, corona is crown in Spanish, now does that crown on a bottle of corona beer make sense.

  • @michaelpapadopoulos6054
    @michaelpapadopoulos6054 3 ปีที่แล้ว +8

    - "If you think this is bad ooohh weee are you in for a surprise as climate change ramps up".
    I know this vid is about the coronavirus but i think more people need to realise this. Climate change cannot be compared with little things such as a pandemic, a complete collapse of the economy and growing inequality. Everyone agrees that 2020 is going to be remembered as one of the most sucky years of modern history. What we need to understand as a species is that climate change is going to make it so that every year is like 2020 all the time but then it is going to keep getting worse. We are not killing the planet. We are just destroying the intricate balance on which our way of life is based.

  • @Ryan6.022
    @Ryan6.022 3 ปีที่แล้ว +37

    Okay if Meow's parents named him that just imagine the bullying he went through.

    • @thethoughtemporium
      @thethoughtemporium  3 ปีที่แล้ว +63

      He named himself that later in life.

    • @Ryan6.022
      @Ryan6.022 3 ปีที่แล้ว +29

      @@thethoughtemporium then he is super awesome

    • @nefariousyawn
      @nefariousyawn 3 ปีที่แล้ว +13

      @@Ryan6.022 I'm imagining a hyper intelligent grad student that went on a psychedelic vision quest of a lifetime. From this he gained a sense of humor, a sense of purpose, and superhuman powers of chill. I've had friends attempt to rename themselves after a heavy trip, and none of them were this cool.

    • @nahometesfay1112
      @nahometesfay1112 3 ปีที่แล้ว +6

      @@thethoughtemporium Is his first name Meow and his last name Meow Meow? Does his name follow the first, middle, last form?

    • @davidmaisel8062
      @davidmaisel8062 3 ปีที่แล้ว

      @@thethoughtemporium He just got more awesome!

  • @bdnugget
    @bdnugget 3 ปีที่แล้ว +18

    Wow, I've used TLC a lot at the medicinal chemistry lab to monitor chemical reactions. Those anti-body tests are like ultra overdrive TLC, it's awesome

  • @SenorRu
    @SenorRu 3 ปีที่แล้ว +12

    I hate how the most common anti-mask argument is "It gives people a false sense of security and they stop social distancing". Because simply educating people is too hard.

  • @thenimbo2
    @thenimbo2 3 ปีที่แล้ว +15

    Please be careful about recommending ubiquitous testing. At very low prevalence levels, (sub the "prevalence threshold" for the test), the precision (PPV) drops rapidly. In places like NYC, where the prevalence is 1% or less, a large majority of positives end up being false. Until tests get to ultra-high >99.9% specificity, the prevalence threshold, given their sensitivity, is >3%.

    • @ukaszMarianszki
      @ukaszMarianszki 3 ปีที่แล้ว +4

      Getting a false positive is way less of an issue than missing a case, because the worst that can happen to you in that case is getting isolated, which you should be doing anyway

    • @GigsVT
      @GigsVT 3 ปีที่แล้ว +4

      @@ukaszMarianszki pretending that isolation has no cost is ridiculous

  • @flopilop3808
    @flopilop3808 3 ปีที่แล้ว +20

    I love the frozen peas used as cooling agent :DDD

  • @nucspartan321
    @nucspartan321 3 ปีที่แล้ว +2

    great video, enough over my head to make me realize how complicated it all really is

  • @georgelosasso3835
    @georgelosasso3835 3 ปีที่แล้ว +1

    Hey where did you get that antibody test that you did in the video? I’m immune compromised and I do monthly igg replacement therapy, and I would be interested to test myself to see if any covid antibodies have worked their way into my igg infusions. I would want so self administer because then I could avoid labs and potential exposure.

  • @ScotlandTheBrave_1
    @ScotlandTheBrave_1 3 ปีที่แล้ว +5

    I’m not sure if I’m taking your final point the wrong way but I thought it was quite controversial. Yes this is a temporary “new normal” and it kind of is a new normal in the sense that once we get over this virus we will react like Asian populations have done for decades aka wear a mask if you are sick. I’m not sure if you were implying that you’ll have to wear a mask for the rest of our lives, constantly? Correct me if I’m wrong on that one. We will get back to normal without the constant need to wear masks. We will socialise in bars pubs and clubs again. We will go on holiday again. All without social distancing and masks. It should be a selective thing. We need to encounter disease for our bodies to protect against them (I won’t patronise you because you’re well qualified for this OBVIOUSLY🤣). Masks won’t be weird anymore, people will wear them when they deem fit (after this pandemic) and people will be more open minded about wearing them. I think the problem with this virus was the initial uptake of masks either because they felt embarrassed or they thought it was stupid which is a valid reason because yes it is weird, but now it’s a whole new kettle of Fish people will have a much much faster reaction to future pandemics (if that’s what you mean by new normal). We can’t and won’t constantly wear masks after this virus has been contained and defeated, it’s just not socially viable, we are very social species and masks hinder our ability to connect with people. I’ve not been outside in weeks and I’ve only been outside 5 times in the past 3 months and that’s terrible because I’m feeling a little depressed. I’m doing my chemistry lectures from my bed and I’d say I easily spend 23.5 hours in bed which is utterly dreadful. At the start of the pandemic I’d go on 125km cycles twice a week for about 6 months going 25km walks but now I’ve been broken I guess. I’m in the Royal Air Force and I’ve have not flown in 11 months I’ve missed hundreds of hours of flying and activities I’m so sad. What I’m trying to say is we cannot and will not continue living like this and we will go back to a full normal with added reactions. This is all about gaining a valid reaction to this so we are prepared in the future, whether that’s from governmental spending in science, social norms in the sense of masks and social distancing, we will be more prepared for future iterations of this generation killer.

  • @combin8or
    @combin8or 3 ปีที่แล้ว +6

    Stellar video, Justin. Good humor, too.
    I’m going to have to watch it a couple more times and check out those papers.

  • @sambrandner
    @sambrandner 3 ปีที่แล้ว +29

    Actually kind of blown away that you just exploit the RNAs goal to self replicate but do it in a lab and look for the result that it’s duplicated exponentially 🤯

    • @wesleymays1931
      @wesleymays1931 3 ปีที่แล้ว +2

      This is called "tricking the enemy"

    • @masonbarber871
      @masonbarber871 3 ปีที่แล้ว +2

      @@wesleymays1931 So I guess we are testing for covid by tricking, backstabbing, and quite possibly bamboozling a virus. I love science.

  • @RabbeSandelin
    @RabbeSandelin 3 ปีที่แล้ว +3

    I have been looking for something like this for a long time, thanks. The only thing I disliked was the ”Don't be alarmed. But be alarmed, this is the new normal”-bit. In Finland we have a lot of new cases now, but zero people in intensive care for a month, and a just handful getting hospital treatment, even as very few bother with the masks. Is this because hand washing, distancing and protection of risk groups have been effective, or has something happened to the virus itself during summer? It is mutating, after all. I think the jury is still out on near future developments.

  • @joeblow4035
    @joeblow4035 3 ปีที่แล้ว +3

    at 32:08 : polyclonal antibodies are distinct antibodies and not one that binds to many epitopes.

  • @covodex516
    @covodex516 3 ปีที่แล้ว +9

    21:25 the googly eyes make your results more accurate.

    • @CodingCorvus
      @CodingCorvus 3 ปีที่แล้ว

      didn't notice that before, thx.

  • @claudiog.7397
    @claudiog.7397 3 ปีที่แล้ว

    Great vid and great link collection in the description. Thank you.

  • @Danspy501st
    @Danspy501st 2 ปีที่แล้ว +1

    "It is like strapping a Corvette engine on your lawn mower"
    I might not be dumb, but I might be dumb enough to try that for shits and giggles XD

  • @coronal2207
    @coronal2207 3 ปีที่แล้ว +79

    "We live in a cyberpunk dystopia" Video liked.

    • @moncza1866
      @moncza1866 2 ปีที่แล้ว

      I can't find it but I want to

  • @serkanergun0
    @serkanergun0 3 ปีที่แล้ว +32

    Isnt it Loop mediated isothermal AMPlication?

  • @jamisonturner9284
    @jamisonturner9284 3 ปีที่แล้ว +1

    It makes me happy to know that there’s 80,000 other people out there who are actually interested in how things in the world work

    • @studioreep7449
      @studioreep7449 3 ปีที่แล้ว

      And then there are THOSE dumbasses

    • @sababugs1125
      @sababugs1125 3 ปีที่แล้ว

      @@studioreep7449 dumbases ?
      Dude calling them dumb is an insult to actually dumb people . You're giving those people way too much credit

  • @nodvick
    @nodvick 3 ปีที่แล้ว

    @the thought emporium
    off topic question.. Since your lactose intolerance modification wore off, it has me wondering. If you were to use a custom retrovirus to induce CIPA in yourself, would that also ware off?

  • @arantes6
    @arantes6 3 ปีที่แล้ว +14

    39:12 I was almost as impressed by the fact that the auto-subtitles transcribed "Cheeto von Gropensnatcher" correctly as by the quality of the video ^^

  • @jay-rad8303
    @jay-rad8303 3 ปีที่แล้ว +6

    I am so glad you made this video! You are educating so many people about such a serious problem and it is honestly people like you that are keeping this world alive. Keep up the amazing work man :)

  • @aBradApple
    @aBradApple 3 ปีที่แล้ว +1

    That moment when you realize how much more science you need to learn... and the moment persists throughout the video. Sadly, my rudimentary understanding of bioscience may have dampened the intended response to this information - but I am now taking this issue more seriously. Thank you for this extended content, good sir.

    • @aBradApple
      @aBradApple 3 ปีที่แล้ว +1

      I have downloaded this video for future reference and dissemination.

    • @karak962
      @karak962 2 ปีที่แล้ว

      ❤️ it’s great you took time to learn! i don’t know much either even though i love this stuff.

  • @symik3
    @symik3 3 ปีที่แล้ว +1

    This is unique content on youtube, i have not found anything similiar to it. I love your channel, altough i dont understand anything. Guess i will stick with my area of expertise. Great work tho.

  • @bmw61j60
    @bmw61j60 3 ปีที่แล้ว +4

    I think it's interesting that at the beginning of your video you basically say that no political talk should be made in the comments, then you go on to make a lot of political statements for 5 minutes at the end of your video.
    That being said, it's a great video, but I lost the ability to use this in my classroom when you went on a political rant at the end.
    I love your videos, and I hope you'll make one about T-Cell immunity because it gets old explaining it to people who don't understand even the most basic parts of biology. Keep up the good work!

    • @WarningStrangerDanger
      @WarningStrangerDanger ปีที่แล้ว +1

      It is simply outdated at this point. The downside to such long videos is that you can't select for the information that withstood the test of time and set aside the parts that aged poorly.

  • @kalechapo8291
    @kalechapo8291 3 ปีที่แล้ว +5

    LAMP I would assume is them using the “L” from loop and the “AMP” from amplification but it is a far stretch lol

  • @michaelkincaid9582
    @michaelkincaid9582 3 ปีที่แล้ว +1

    Do labs ever do batch testing? Like, combining samples from 10 patients in one test, and retesting positives?

  • @C2H5OHist
    @C2H5OHist 3 ปีที่แล้ว

    Nice, watching this while waiting for my test results. Will share the result and the test type when I find out, likely on saturday.

  • @jaxsonsorenson3659
    @jaxsonsorenson3659 2 ปีที่แล้ว +5

    It's really funny watching this video after all the stuff came out from the CDC.

    • @AnalogDude_
      @AnalogDude_ 2 ปีที่แล้ว +2

      he watched to much t.v.

    • @WarningStrangerDanger
      @WarningStrangerDanger ปีที่แล้ว +3

      Specifically the masks bit. Masks were not very effective. 6 feet was an arbitrary decision. Totally avoiding people was the safest option.

    • @jaxsonsorenson3659
      @jaxsonsorenson3659 ปีที่แล้ว +1

      @@WarningStrangerDanger Yes, 100%, but also the actual virus for everyone who isn't the age of 60 or has severe immune compromises, it has a 99.9% survival rate.

  • @8b8b8b
    @8b8b8b 3 ปีที่แล้ว +3

    Instead of disliking the video, read the citation in the description and check the sources, and then compare that to the citation of sources that says otherwise, if said citation exists at all

    • @XavierXonora
      @XavierXonora 3 ปีที่แล้ว +2

      You can't expect people to do work to debunk their own fallacies. It's a psychological disease

  • @timseguine2
    @timseguine2 3 ปีที่แล้ว +1

    I work on software for an automated processing platform (qPCR and microarray), and it is nice to understand a bit better about how the primers and fluorescence markers work. The only real understanding I had to have was: it grows a lot and glows in this specific way if you do "biology stuff" to it. But it is nice to know what the colleagues are actually up to.

    • @karak962
      @karak962 2 ปีที่แล้ว

      that’s awesome!!!!!!

  • @crazystuffproduction
    @crazystuffproduction 3 ปีที่แล้ว

    I wish this was 2 hours long in a way, but very great info here. and good final points, Really agree with your summery

  • @xadadax5014
    @xadadax5014 3 ปีที่แล้ว +10

    Hum.. whats going on with the dislikes? Are bots auto-disliking covid related vídeos or something?

    • @Basement-Science
      @Basement-Science 3 ปีที่แล้ว +10

      CovIDIOTs.

    • @WanderTheNomad
      @WanderTheNomad 3 ปีที่แล้ว

      I don't consider the amount of dislikes high until it reaches 1000+.

  • @firstlast446
    @firstlast446 3 ปีที่แล้ว +170

    "I hope this will be enough of a wakeup call"
    haha, god I wish.

    • @StormBurnX
      @StormBurnX 3 ปีที่แล้ว +10

      the people watching these kinds of videos mostly are the people who already know it's bad. if there was a way to force this video's knowledge on everyone and force them to have a high enough IQ to comprehend it, then that would be a wakeup call.
      But no, the only brainwashing technology we have is 5G and coronavir- wait...

    • @LimabeanStudios
      @LimabeanStudios 3 ปีที่แล้ว +6

      Yeah at this point everyone has already formed their opinions on this whole situation, and that usually only changes when someone who downplays covid loses a family member.

    • @Herr_Brechmann
      @Herr_Brechmann 3 ปีที่แล้ว

      @@StormBurnX The whole world is dying, ffs you guys

    • @eideticex
      @eideticex 3 ปีที่แล้ว +4

      From what I have seen, I doubt the wakeup call will work either. I have seen plenty of people say "it'll all be over after the election" or similarly stupid nonsensical bullshit. All while having a friend or family member disappear to their home for a few weeks with COVID-19. They literally do not see or hear it happening right in front of them.

    • @TheComputadude
      @TheComputadude 3 ปีที่แล้ว +2

      @@eideticex And you also have people like Herman Cain who die from it and tweet from the grave about how it wasn't that bad.

  • @MayBugg1049
    @MayBugg1049 2 ปีที่แล้ว +2

    And here we are 1 year later at 343 million confirmed cases and 5.58 million deaths... 😭

  • @justsomeperson5110
    @justsomeperson5110 3 ปีที่แล้ว +1

    Awesomely informative! Thanks!

  • @DeathProductions200
    @DeathProductions200 3 ปีที่แล้ว +6

    "each tan you open gives you a heart" oh no. I can get like 600 hearts a day just from forgetting how to spell

  • @PowerhouseCell
    @PowerhouseCell 3 ปีที่แล้ว +10

    This is a really detailed and amazing video! This information is important for the public to know, and I'm glad you're putting it out there. I hope my videos become as well-explained as yours one day haha :D

    • @CodingCorvus
      @CodingCorvus 3 ปีที่แล้ว

      with hard work and dedication you will one day.

  • @ga5712
    @ga5712 3 ปีที่แล้ว

    Am i right in thinking that incorporating colorimetric or spectroscopic (% absorption) analysis of the LAMP product would accurately indicate the vital load?

  • @jorgealonso2238
    @jorgealonso2238 3 ปีที่แล้ว

    I want to thank you for the fantastic video. I have only watched 2 of your videos so far. One on spiderbeer and this one. I just learned more about my own body and how things work. Your videos are priceless. I'm buying a T :)

  • @anthea9697
    @anthea9697 3 ปีที่แล้ว +15

    Hi Justin, I’ve been binging these videos since I found them. I’m very interested in this line of work but am a physics junior already, with plans for a masters in electrical engineering, so my time to branch into biology while in undergrad is limited. Do you have any suggestions on classes to take that would set me up well to combine engineering, physics, coding, and bio? Or suggestions on extracurriculars or diy stepping stones?
    Thanks to you I’m looking into a magnet implant, depending on my future specialization, this could be super useful.

    • @thethoughtemporium
      @thethoughtemporium  3 ปีที่แล้ว +17

      The easiest way to get started is probably on your own, but there's nothing stopping you from taking an intro to bio or biochem class. Though fair warning, they'll bombard you with an enormous amount of information. But if you just want to learn on your own, crash course has a bunch of great series on the topic. I also suggest the book "the manga guide to molecular biology". It's cute, well written, and covers a ton of stuff. Beyond that, look at places like amino.bio, biobits or carolina biological and get yourself one of their fantastic kits. You'll get some hands experience and get to see how some of this stuff works for yourself

    • @alima9353
      @alima9353 3 ปีที่แล้ว +1

      What a coincidence I’m studying molecular biology at university but maybe want to stem out into physics. Maybe biophysics? There are similarities between biology and physics which may be surprising like molecular motors.
      Anyway good luck with your journey !

    • @drkastenbrot
      @drkastenbrot 2 ปีที่แล้ว

      I am doing EE at a uni and biochemistry and whatever else interests me on my own terms. Doing any biology at uni is very, very harsh.

  • @remanjecarter2787
    @remanjecarter2787 3 ปีที่แล้ว +7

    Ah the science side of this
    I love your videos, they're informative and go into a satisfying depth of the topics

  • @firstnamelastname3468
    @firstnamelastname3468 3 ปีที่แล้ว

    So very well done, thank you. I have a much better understanding of qPCR results

  • @lizaeves9920
    @lizaeves9920 3 ปีที่แล้ว

    I am currently a high school student and my school district decided from the start to not open up the schools in that district. This does suck as there is a major social aspect to school, but I`m becoming more grateful to the fact that they kept it to online school from the start as all of the other districts in the area are closing schools and are vastly underprepared for online school.

  • @hika8298
    @hika8298 3 ปีที่แล้ว +5

    this was a nice summary of what I needed to know and what is currently known

  • @dallinlaw6785
    @dallinlaw6785 3 ปีที่แล้ว +13

    Please change your thumbnails, it's really hard to tell the difference between streams and normal content.

  • @darkhoodchief
    @darkhoodchief 3 ปีที่แล้ว

    Very informative. I wasn't aware of the LAMP testing but it's very interesting. This video explains why testing is slow in some countries.

  • @matthewsidaway1437
    @matthewsidaway1437 2 ปีที่แล้ว +2

    so interesting I've watched it twice - good job

  • @alexbombbird353
    @alexbombbird353 3 ปีที่แล้ว +80

    How is there almost a 7:1 like to dislike ratio on this video? You would think the people subscribed to this channel would be the sort to know better than to subscribe to baseless conspiracies. Not to mention you clearly spent a lot of time thoroughly researching this and cited sources that they could check and see are reputable.

    • @Basement-Science
      @Basement-Science 3 ปีที่แล้ว +17

      Probably because a lot of CovIdiots get it recommended who are not subscribers.

    • @C2H5OHist
      @C2H5OHist 3 ปีที่แล้ว +40

      I disliked because I don't like politics in my scientific entertainment

    • @microwave221
      @microwave221 3 ปีที่แล้ว +7

      People are eternally disappointing, and the number of comments alleging that the whole thing is a hoax should explain where it's all coming from. A vocal minority, but thankfully a minority none the less

    • @narpassword3546
      @narpassword3546 3 ปีที่แล้ว +11

      In this day, where the right are blatant anti-intellectuals who dismiss any science that they don't "agree" with, science is inherently political

    • @Yildun28
      @Yildun28 3 ปีที่แล้ว +17

      @@C2H5OHist Same here. The political digs undermine the credibility of the video. If I can spot fallacious reasoning/data on things I am well informed about, it makes me question whether I can trust him on things I am not and came to the video to learn more.

  • @kareng4294
    @kareng4294 2 ปีที่แล้ว +5

    I was expecting to see something on the PCR thresholds, but they weren't mentioned. What are your thoughts on the recommended threshold of up to 40 cycles? Also, would appreciate any insight on why breakthrough cases only get up to 28 cycles. Thanks!

  • @tyrian_trader
    @tyrian_trader 3 ปีที่แล้ว

    Huge thanks for not over-simplifying this too much. Also, why are so many people down-voting this?

  • @papastalin69
    @papastalin69 ปีที่แล้ว +1

    i currently have covid and this video was very enlightening. thank you :)

  • @caelaise
    @caelaise ปีที่แล้ว +6

    man it is depressing to know that we used to think there was a chance wed do something about all this instead of just arbitrarily deciding it was over when it wasnt and refusing to do anything more

  • @kurtnelle
    @kurtnelle 3 ปีที่แล้ว +5

    I can't believe I sat through this looong video about a field of science that I knew nothing about and actually learned something. This is some high-quality content.

  • @davidmaisel8062
    @davidmaisel8062 3 ปีที่แล้ว +2

    Amazingly well presented and well explained. Thank you for your hard work Justin!

  • @mystwalker479
    @mystwalker479 3 ปีที่แล้ว

    This dude's content is like the answer to my questions

  • @hikaru-hokkyokusei
    @hikaru-hokkyokusei 3 ปีที่แล้ว +13

    Lol, i am proud of myself that i made it till the end of the video. If our biology classes were like this, they'd be more interesting to attend.

    • @averagecornenjoyer6348
      @averagecornenjoyer6348 3 ปีที่แล้ว +2

      hentai ousama

    • @xenonram
      @xenonram 3 ปีที่แล้ว

      If teachers could spend DAYS/weeks making a video about a single example of a single topic, that would be true, but then an undergrad degree would take about 2 decades to complete.

  • @edol33t
    @edol33t 3 ปีที่แล้ว +4

    Great video, one of your best and one of the more detailed analysis on covid19 I've ever seen. Only thing is, imho, the tone in the summary section got a bit preachy and I feel like it diminishes the seriousness of the rest of the video, irregardless of the fact that one may or may not agree. Great job nonetheless.

  • @brianhillier7052
    @brianhillier7052 2 ปีที่แล้ว

    don't forget to activate windows lol........ awesome videos as usual. I expect intricate details, that I know you always deliver on. Thankyou for sharing the knowledge. another great video!

  • @felipemota7249
    @felipemota7249 3 ปีที่แล้ว

    Such an amazing and instructive video

  • @llFike
    @llFike 3 ปีที่แล้ว +3

    thank you, no other science channel is explaining covid detection carefully and detailed like you do.

  • @Lambda_Ovine
    @Lambda_Ovine 3 ปีที่แล้ว +10

    38:35 This is something that people need to understand. People and the media get way to fixated on the mortality rate, but this is not the flue and the virus can do long lasting, live-changing damage in your body.

  • @marconius101
    @marconius101 3 ปีที่แล้ว

    thank you for this vid......Much love from the Netherlands...

  • @biosparkles9442
    @biosparkles9442 11 หลายเดือนก่อน

    I run qPCR tests for a fungal pathogen regularly and some primers do just have a bit of background fluorescence (extra junk), you can apply a correction to the output curves to account for that though
    I want a pipetting robot so bad, I use 384 well plates and I've messed up so many samples cos I've lost track of which well I'm at

  • @BillEngwall
    @BillEngwall 3 ปีที่แล้ว +2

  • @jules3311
    @jules3311 3 ปีที่แล้ว +7

    It's nice to have a real video on this channel !
    Your streams are cool, but they may belong to a separate channel.

  • @NullByte_-mm4dn
    @NullByte_-mm4dn 3 ปีที่แล้ว +2

    Finally a comprehensive video on this subject. Love your content in general, but this particular video needs to reach a wider audience. I hope that the algorithm picks this up.

  • @Jay-tn6xp
    @Jay-tn6xp 2 ปีที่แล้ว

    Use the Respiratory Panel PCR test keeping within correct amp cycles and test for all those respiratory illnesses that vanished. Even better lets run a certain percentage of positive cases through cell culture and electonmicroscope identification.

  • @oaxis8198
    @oaxis8198 3 ปีที่แล้ว +3

    “250 more death by the time you watched this video”
    Me thinking video is 15 min long: oh shit, that’s like 2 death a min or somt
    Me seeing that it’s 48 min long: oh ok but still

  • @askplays
    @askplays 3 ปีที่แล้ว +3

    Nice i was looking for an explenation of how testing works for a while!

  • @vitormhenrique
    @vitormhenrique 3 ปีที่แล้ว +1

    Awesome work! Thanks!

  • @tec4303
    @tec4303 3 ปีที่แล้ว +1

    Thank you for this video!

  • @MrAntraxico
    @MrAntraxico 3 ปีที่แล้ว +3

    Seeing that ending now... Oh boy, I sure love how we all got together and tried to solve every important problem we had!
    In any case, thanks for your videos man. I am not in the biomedical field but I love watching your videos and hopefully learning something useful.

  • @Sporkekw
    @Sporkekw 3 ปีที่แล้ว +5

    You deserve 200 times more views... This sole video has given us more information than anything any youtuber has posted ... Thank you ❤️

  • @tanmayghildiyal3149
    @tanmayghildiyal3149 3 ปีที่แล้ว

    Amazingly Awesome content. Loved it

  • @arjunlagisetty
    @arjunlagisetty 3 ปีที่แล้ว

    Should have stuck to that bio chemistry classes in college. I surprisingly enjoyed this video