Batch Processing Morphometric Analysis With ImageJ

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  • เผยแพร่เมื่อ 27 ต.ค. 2024
  • We use macros in ImageJ to automate the morphometric analysis process.
    Here is the macro that I used in the video
    run("8-bit");
    run("Auto Threshold", "method=RenyiEntropy");
    setOption("BlackBackground", false);
    run("Dilate");
    run("Fill Holes");
    run("Erode");
    //setTool("wand");
    doWand(2560, 400);
    floodFill(2468, 472);
    run("Select None");
    run("Analyze Particles...", "size=1.49-Infinity show=Outlines display exclude clear summarize");
    Exercise files
    www.dropbox.co...
    Work cited
    Schindelin, J.; Arganda-Carreras, I. & Frise, E. et al. (2012), "Fiji: an open-source platform for biological-image analysis", Nature methods 9(7): 676-682, PMID 22743772 (on Google Scholar).
    ezvid.com

ความคิดเห็น • 1

  • @unknownLK1
    @unknownLK1 7 ปีที่แล้ว

    Do you have any idea how I can use batch processing for a video plugin?
    The one i'm trying to use right now is ImageJ CASA