Batch Processing Morphometric Analysis With ImageJ
ฝัง
- เผยแพร่เมื่อ 27 ต.ค. 2024
- We use macros in ImageJ to automate the morphometric analysis process.
Here is the macro that I used in the video
run("8-bit");
run("Auto Threshold", "method=RenyiEntropy");
setOption("BlackBackground", false);
run("Dilate");
run("Fill Holes");
run("Erode");
//setTool("wand");
doWand(2560, 400);
floodFill(2468, 472);
run("Select None");
run("Analyze Particles...", "size=1.49-Infinity show=Outlines display exclude clear summarize");
Exercise files
www.dropbox.co...
Work cited
Schindelin, J.; Arganda-Carreras, I. & Frise, E. et al. (2012), "Fiji: an open-source platform for biological-image analysis", Nature methods 9(7): 676-682, PMID 22743772 (on Google Scholar).
ezvid.com
Do you have any idea how I can use batch processing for a video plugin?
The one i'm trying to use right now is ImageJ CASA