Hi. Thank you for the video. Here we "estimate stain vectors" for one image and then apply it with the script to others in the project. What if the other images are not suitable for the new values? Does the script apply results based on this script generated image or it calculates on that new image separately?
Hi! If you have selected actual values for the stain vectors, those will be applied to the other images. Indeed you can only do this if you know your images are very very similar and there is no variation in colour profiles or staining. Certainly a step that might be better to do manually for each image if you have a manageable number of them.
@@lanicolassathank you. If possible, I would like to annotate each image with areas (or select whole image) to estimate stain vectors, and then let the "auto" adjust to be applied to all images separately.
Hi. Thank you for the video. Here we "estimate stain vectors" for one image and then apply it with the script to others in the project. What if the other images are not suitable for the new values? Does the script apply results based on this script generated image or it calculates on that new image separately?
Hi! If you have selected actual values for the stain vectors, those will be applied to the other images. Indeed you can only do this if you know your images are very very similar and there is no variation in colour profiles or staining. Certainly a step that might be better to do manually for each image if you have a manageable number of them.
@@lanicolassathank you. If possible, I would like to annotate each image with areas (or select whole image) to estimate stain vectors, and then let the "auto" adjust to be applied to all images separately.